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@@ -17,11 +17,11 @@ import { AccessibleSurfaceAreaProvider } from '../accessible-surface-area';
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import { ANVILContext } from './anvil/common';
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export const ANVILParams = {
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- numberOfSpherePoints: PD.Numeric(120),
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- stepSize: PD.Numeric(1),
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+ numberOfSpherePoints: PD.Numeric(120, { min: 35, max: 700, step: 1 }, { description: 'Number of spheres/directions to test for membrane placement. Original value is 350.' }),
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+ stepSize: PD.Numeric(1, { min: 0.25, max: 4, step: 0.25 }, { description: 'Thickness of membrane slices that will be tested' }),
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minThickness: PD.Numeric(20, { min: 10, max: 30, step: 1}, { description: 'Minimum membrane thickness used during refinement' }),
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maxThickness: PD.Numeric(40, { min: 30, max: 50, step: 1}, { description: 'Maximum membrane thickness used during refinement' }),
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- afilter: PD.Numeric(40),
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+ afilter: PD.Numeric(40, { min: 10, max: 100, step: 1 }, { description: 'Absolute ASA cutoff above which residues will be considered' }),
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membranePointDensity: PD.Numeric(2, { min: 0.1, max: 10, step: 0.1 }, { description: 'Distance between points representing membrane layer'})
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};
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export type ANVILParams = typeof ANVILParams
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JonStargaryen