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specify assemblyId for some test cases

Sebastian Bittrich 3 years ago
parent
commit
33d20971d9
1 changed files with 124 additions and 31 deletions
  1. 124 31
      src/viewer/index.html

+ 124 - 31
src/viewer/index.html

@@ -165,127 +165,220 @@
                 },
                 {
                     id: '1LTI',
-                    info: 'medium: local symmetry (C5)'
+                    info: 'medium: local symmetry (C5)',
+                    props: {
+                        assemblyId: '1'
+                    }
                 },
                 {
                     id: '1QO1',
-                    info: 'medium: C-alpha only, local symmetries (C10, C3)'
+                    info: 'medium: C-alpha only, local symmetries (C10, C3)',
+                    props: {
+                        assemblyId: '1'
+                    }
                 },
                 {
                     id: '6V9Q',
-                    info: 'medium: local symmetries (H, C2)'
+                    info: 'medium: local symmetries (H, C2)',
+                    props: {
+                        assemblyId: '1'
+                    }
                 },
                 {
                     id: '6R6B',
-                    info: 'medium: local symmetries (H x2)'
+                    info: 'medium: local symmetries (H x2)',
+                    props: {
+                        assemblyId: '1'
+                    }
                 },
                 {
                     id: '2VTU',
-                    info: 'medium: octahedral symmetry (O)'
+                    info: 'medium: octahedral symmetry (O)',
+                    props: {
+                        assemblyId: '1'
+                    }
                 },
                 {
                     id: '4NWP',
-                    info: 'medium: tetrahedral symmetry (T)'
+                    info: 'medium: tetrahedral symmetry (T)',
+                    props: {
+                        assemblyId: '1'
+                    }
                 },
                 {
                     id: '1RB8',
-                    info: 'medium-large: small virus capsid, icosahedral symmetry (I)'
+                    info: 'medium-large: small virus capsid, icosahedral symmetry (I)',
+                    props: {
+                        assemblyId: '1'
+                    }
                 },
                 {
                     id: '6QVK',
-                    info: 'large: The cryo-EM structure of bacteriophage phi29 prohead (C5)'
+                    info: 'large: The cryo-EM structure of bacteriophage phi29 prohead (C5)',
+                    props: {
+                        assemblyId: '1'
+                    }
                 },
                 {
                     id: '5Y6P',
-                    info: 'large: Structure of the phycobilisome from the red alga Griffithsia pacifica'
+                    info: 'large: Structure of the phycobilisome from the red alga Griffithsia pacifica',
+                    props: {
+                        assemblyId: '1'
+                    }
                 },
                 {
                     id: '6O2S',
-                    info: 'large: Deacetylated Microtubules (H)'
+                    info: 'large: Deacetylated Microtubules (H)',
+                    props: {
+                        assemblyId: '1'
+                    }
                 },
                 {
                     id: '5MQ7',
-                    info: 'large: Structure of AaLS-13'
+                    info: 'large: Structure of AaLS-13',
+                    props: {
+                        assemblyId: '1'
+                    }
                 },
                 {
                     id: '5IV5',
-                    info: 'large: Cryo-electron microscopy structure of the hexagonal pre-attachment T4 baseplate-tail tube complex'
+                    info: 'large: Cryo-electron microscopy structure of the hexagonal pre-attachment T4 baseplate-tail tube complex',
+                    props: {
+                        assemblyId: '1'
+                    }
                 },
                 {
                     id: '3JC8',
-                    info: 'large: Architectural model of the type IVa pilus machine in a piliated state'
+                    info: 'large: Architectural model of the type IVa pilus machine in a piliated state',
+                    props: {
+                        assemblyId: '1'
+                    }
                 },
                 {
                     id: '4V99',
-                    info: 'large: The Crystallographic Structure of Panicum Mosaic Virus'
+                    info: 'large: The Crystallographic Structure of Panicum Mosaic Virus',
+                    props: {
+                        assemblyId: '1'
+                    }
                 },
                 {
                     id: '3J3Q',
-                    info: 'large: Atomic-level structure of the entire HIV-1 capsid'
+                    info: 'large: Atomic-level structure of the entire HIV-1 capsid',
+                    props: {
+                        assemblyId: '1'
+                    }
                 },
                 {
                     id: '6NCL',
-                    info: 'large: Near-atomic structure of icosahedrally averaged PBCV-1 capsid'
+                    info: 'large: Near-atomic structure of icosahedrally averaged PBCV-1 capsid',
+                    props: {
+                        assemblyId: '1'
+                    }
                 },
                 {
                     id: '6EKC',
-                    info: 'large: Crystal structure of the BSD2 homolog of Arabidopsis thaliana bound to the octameric assembly of RbcL from Thermosynechococcus elongatus'
+                    info: 'large: Crystal structure of the BSD2 homolog of Arabidopsis thaliana bound to the octameric assembly of RbcL from Thermosynechococcus elongatus',
+                    props: {
+                        assemblyId: '1'
+                    }
                 },
                 {
                     id: '1M4X',
-                    info: 'large: PBCV-1 virus capsid, quasi-atomic model'
+                    info: 'large: PBCV-1 virus capsid, quasi-atomic model',
+                    props: {
+                        assemblyId: '1'
+                    }
                 },
                 {
                     id: '4V5A',
-                    info: 'large: Structure of the Ribosome Recycling Factor bound to the Thermus thermophilus 70S ribosome with mRNA, ASL-Phe and tRNA-fMet'
+                    info: 'large: Structure of the Ribosome Recycling Factor bound to the Thermus thermophilus 70S ribosome with mRNA, ASL-Phe and tRNA-fMet',
+                    props: {
+                        assemblyId: '1'
+                    }
                 },
                 {
                     id: '4UDF',
-                    info: 'large: STRUCTURAL BASIS OF HUMAN PARECHOVIRUS NEUTRALIZATION BY HUMAN MONOCLONAL ANTIBODIES'
+                    info: 'large: STRUCTURAL BASIS OF HUMAN PARECHOVIRUS NEUTRALIZATION BY HUMAN MONOCLONAL ANTIBODIES',
+                    props: {
+                        assemblyId: '1'
+                    }
                 },
                 {
                     id: '6J5K',
-                    info: 'Cryo-EM structure of the mammalian ATP synthase tetramer bound with inhibitory protein IF1'
+                    info: 'Cryo-EM structure of the mammalian ATP synthase tetramer bound with inhibitory protein IF1',
+                    props: {
+                        assemblyId: '1'
+                    }
                 },
                 {
                     id: '6RVV',
-                    info: 'Structure of left-handed protein cage consisting of 24 eleven-membered ring proteins held together by gold (I) bridges.'
+                    info: 'Structure of left-handed protein cage consisting of 24 eleven-membered ring proteins held together by gold (I) bridges.',
+                    props: {
+                        assemblyId: '1'
+                    }
                 },
                 {
                     id: '6EK5',
-                    info: 'Near-atomic resolution structure of a plant geminivirus determined by electron cryo-microscopy'
+                    info: 'Near-atomic resolution structure of a plant geminivirus determined by electron cryo-microscopy',
+                    props: {
+                        assemblyId: '1'
+                    }
                 },
                 {
                     id: '4V93',
-                    info: 'Fitted coordinates for Lumbricus terrestris hemoglobin cryo-EM complex'
+                    info: 'Fitted coordinates for Lumbricus terrestris hemoglobin cryo-EM complex',
+                    props: {
+                        assemblyId: '1'
+                    }
                 },
                 {
                     id: '5VLZ',
-                    info: 'Backbone model for phage Qbeta capsid'
+                    info: 'Backbone model for phage Qbeta capsid',
+                    props: {
+                        assemblyId: '1'
+                    }
                 },
                 {
                     id: '5XTI',
-                    info: 'Cryo-EM architecture of human respiratory chain megacomplex-I2III2IV2'
+                    info: 'Cryo-EM architecture of human respiratory chain megacomplex-I2III2IV2',
+                    props: {
+                        assemblyId: '1'
+                    }
                 },
                 {
                     id: '6BY7',
-                    info: 'Folding DNA into a lipid-conjugated nano-barrel for controlled reconstitution of membrane proteins'
+                    info: 'Folding DNA into a lipid-conjugated nano-barrel for controlled reconstitution of membrane proteins',
+                    props: {
+                        assemblyId: '1'
+                    }
                 },
                 {
                     id: '6C50',
-                    info: 'Cross-alpha Amyloid-like Structure alphaAmS'
+                    info: 'Cross-alpha Amyloid-like Structure alphaAmS',
+                    props: {
+                        assemblyId: '1'
+                    }
                 },
                 {
                     id: '6K3I',
-                    info: 'Salmonella hook in curved state - 66 subunit models'
+                    info: 'Salmonella hook in curved state - 66 subunit models',
+                    props: {
+                        assemblyId: '1'
+                    }
                 },
                 {
                     id: '1UNO',
-                    info: 'Crystal structure of a d,l-alternating peptide. Double-starnded helix from beta-sheets.'
+                    info: 'Crystal structure of a d,l-alternating peptide. Double-starnded helix from beta-sheets.',
+                    props: {
+                        assemblyId: '1'
+                    }
                 },
                 {
                     id: '1GRM',
-                    info: 'REFINEMENT OF THE SPATIAL STRUCTURE OF THE GRAMICIDIN A TRANSMEMBRANE ION-CHANNEL. Single-starnded helix from beta-sheet. NMR structure.'
+                    info: 'REFINEMENT OF THE SPATIAL STRUCTURE OF THE GRAMICIDIN A TRANSMEMBRANE ION-CHANNEL. Single-starnded helix from beta-sheet. NMR structure.',
+                    props: {
+                        assemblyId: '1'
+                    }
                 },
                 {
                     id: '1B5F',