/** * Copyright (c) 2018 mol* contributors, licensed under MIT, See LICENSE file for more info. * * @author Alexander Rose */ import { ColorScale, Color } from 'mol-util/color'; import { Location } from 'mol-model/location'; import { StructureElement, Link } from 'mol-model/structure'; import { ColorTheme, LocationColor } from '../color'; import { ParamDefinition as PD } from 'mol-util/param-definition' import { ThemeDataContext } from 'mol-theme/theme'; import { ColorListName, ColorListOptions } from 'mol-util/color/scale'; const DefaultColor = Color(0xCCCCCC) const Description = 'Gives every polymer a unique color based on the position (index) of the polymer in the list of polymers in the structure.' export const PolymerIndexColorThemeParams = { list: PD.Select('RdYlBu', ColorListOptions), } export function getPolymerIndexColorThemeParams(ctx: ThemeDataContext) { return PolymerIndexColorThemeParams // TODO return copy } export type PolymerIndexColorThemeProps = PD.Values export function PolymerIndexColorTheme(ctx: ThemeDataContext, props: PolymerIndexColorThemeProps): ColorTheme { let color: LocationColor const scale = ColorScale.create({ listOrName: props.list, minLabel: 'Start', maxLabel: 'End' }) if (ctx.structure) { const { units } = ctx.structure let polymerCount = 0 for (let i = 0, il = units.length; i 0) ++polymerCount } scale.setDomain(0, polymerCount - 1) const unitIdColor = new Map() for (let i = 0, j = 0, il = units.length; i 0) { unitIdColor.set(units[i].id, scale.color(j)) ++j } } color = (location: Location): Color => { let color: Color | undefined if (StructureElement.isLocation(location)) { color = unitIdColor.get(location.unit.id) } else if (Link.isLocation(location)) { color = unitIdColor.get(location.aUnit.id) } return color !== undefined ? color : DefaultColor } } else { color = () => DefaultColor } return { granularity: 'instance', color, props, description: Description, legend: scale ? scale.legend : undefined } } export const PolymerIndexColorThemeProvider: ColorTheme.Provider = { label: 'Polymer Index', factory: PolymerIndexColorTheme, getParams: getPolymerIndexColorThemeParams }