TmMolStar/src/TmFv3DApp/tmdet-viewer/TmViewer.ts

/**
 * Copyright (c) 2019-2020 mol* contributors, licensed under MIT, See LICENSE file for more info.
 *
 * @author Alexander Rose <alexander.rose@weirdbyte.de>
 * @author Joan Segura <joan.segura@rcsb.org>
 * @author Yana Rose <yana.rose@rcsb.org>
 * @author Sebastian Bittrich <sebastian.bittrich@rcsb.org>
 */
/**
 * Copyright (C) 2023, Protein Bioinformatics Research Group, RCNS
 *
 * Licensed under CC BY-NC 4.0, see LICENSE file for more info.
 *
 * @author Gabor Tusnady <tusnady.gabor@ttk.hu>
 * @author Csongor Gerdan <gerdan.csongor@ttk.hu>
 */

import { Viewer, ViewerProps } from '@rcsb/rcsb-molstar/build/src/viewer';
import { TmDetColorThemeProvider } from '../tmdet-extension/tmdet-color-theme';
import { MembraneOrientationPreset } from '../tmdet-extension/behavior';
import { TmDetLabelProvider } from '../tmdet-extension/labeling';
import { loadInitialSnapshot, rotateCamera, storeCameraSnapshot } from '../tmdet-extension/camera';
import { BuiltInTrajectoryFormat } from 'molstar/lib/mol-plugin-state/formats/trajectory';
import { PresetProps } from '@rcsb/rcsb-molstar/build/src/viewer/helpers/preset';
import { Mat4 } from 'molstar/lib/commonjs/mol-math/linear-algebra';
import { TrajectoryHierarchyPresetProvider } from 'molstar/lib/mol-plugin-state/builder/structure/hierarchy-preset';

export class TmViewer extends Viewer {

    constructor(elementOrId: string | HTMLElement, props: Partial<ViewerProps> = {}) {
        console.log("TmViewer constructor");
        super(elementOrId, props);

        this.initBehavior();
    }

    public async initBehavior() {
        let tree = this.plugin.state.behaviors.build();


        this.plugin.builders.structure.representation.registerPreset(MembraneOrientationPreset);
        this.plugin.representation.structure.themes.colorThemeRegistry.add(TmDetColorThemeProvider);
        this.plugin.managers.lociLabels.addProvider(TmDetLabelProvider);

        await this.plugin.runTask(this.plugin.state.behaviors.updateTree(tree, { doNotUpdateCurrent: true, doNotLogTiming: true }));
    }

    loadStructureFromUrl<P, S>(url: string, format: BuiltInTrajectoryFormat, isBinary: boolean, config?: {
        props?: PresetProps & {
            dataLabel?: string;
        };
        matrix?: Mat4;
        reprProvider?: TrajectoryHierarchyPresetProvider<P, S>;
        params?: P;
    }): Promise<any> {
        this.plugin.canvas3dInitialized.then(() => {
            console.log('Camera initialization started', this.plugin.canvas3d?.camera)
            storeCameraSnapshot(this.plugin); // store if it is not stored yet
            loadInitialSnapshot(this.plugin); // load if there is a stored one

            // INVALID DATA CELL: setTimeout(() => { this.plugin.clear(); }, 100); // clear scene after some delay

            setTimeout(() => { (async () => {
                await rotateCamera(this.plugin);
            })(); }, 500);
        });

        const result = super.loadStructureFromUrl(url, format, isBinary, config);

        return result;
    }

}