gaussian-surface-wireframe.ts 2.8 KB

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  1. /**
  2. * Copyright (c) 2018 mol* contributors, licensed under MIT, See LICENSE file for more info.
  3. *
  4. * @author Alexander Rose <alexander.rose@weirdbyte.de>
  5. */
  6. import { ParamDefinition as PD } from '../../../mol-util/param-definition';
  7. import { VisualContext } from '../../visual';
  8. import { Unit, Structure } from '../../../mol-model/structure';
  9. import { Theme } from '../../../mol-theme/theme';
  10. import { Lines } from '../../../mol-geo/geometry/lines/lines';
  11. import { computeUnitGaussianDensity, GaussianDensityParams, GaussianDensityProps } from './util/gaussian';
  12. import { computeMarchingCubesLines } from '../../../mol-geo/util/marching-cubes/algorithm';
  13. import { UnitsLinesParams, UnitsVisual, UnitsLinesVisual } from '../units-visual';
  14. import { ElementIterator, getElementLoci, eachElement } from './util/element';
  15. import { VisualUpdateState } from '../../util';
  16. async function createGaussianWireframe(ctx: VisualContext, unit: Unit, structure: Structure, theme: Theme, props: GaussianDensityProps, lines?: Lines): Promise<Lines> {
  17. const { smoothness } = props
  18. const { transform, field, idField } = await computeUnitGaussianDensity(unit, props, ctx.webgl).runInContext(ctx.runtime)
  19. const params = {
  20. isoLevel: Math.exp(-smoothness),
  21. scalarField: field,
  22. idField
  23. }
  24. const wireframe = await computeMarchingCubesLines(params, lines).runAsChild(ctx.runtime)
  25. Lines.transformImmediate(wireframe, transform)
  26. return wireframe
  27. }
  28. export const GaussianWireframeParams = {
  29. ...UnitsLinesParams,
  30. ...GaussianDensityParams,
  31. sizeFactor: PD.Numeric(1.5, { min: 0, max: 10, step: 0.1 }),
  32. lineSizeAttenuation: PD.Boolean(false),
  33. ignoreHydrogens: PD.Boolean(false),
  34. }
  35. export type GaussianWireframeParams = typeof GaussianWireframeParams
  36. export function GaussianWireframeVisual(materialId: number): UnitsVisual<GaussianWireframeParams> {
  37. return UnitsLinesVisual<GaussianWireframeParams>({
  38. defaultProps: PD.getDefaultValues(GaussianWireframeParams),
  39. createGeometry: createGaussianWireframe,
  40. createLocationIterator: ElementIterator.fromGroup,
  41. getLoci: getElementLoci,
  42. eachLocation: eachElement,
  43. setUpdateState: (state: VisualUpdateState, newProps: PD.Values<GaussianWireframeParams>, currentProps: PD.Values<GaussianWireframeParams>) => {
  44. if (newProps.resolution !== currentProps.resolution) state.createGeometry = true
  45. if (newProps.radiusOffset !== currentProps.radiusOffset) state.createGeometry = true
  46. if (newProps.smoothness !== currentProps.smoothness) state.createGeometry = true
  47. if (newProps.useGpu !== currentProps.useGpu) state.createGeometry = true
  48. if (newProps.ignoreHydrogens !== currentProps.ignoreHydrogens) state.createGeometry = true
  49. }
  50. }, materialId)
  51. }