gaussian-surface-wireframe.ts 2.6 KB

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  1. /**
  2. * Copyright (c) 2018 mol* contributors, licensed under MIT, See LICENSE file for more info.
  3. *
  4. * @author Alexander Rose <alexander.rose@weirdbyte.de>
  5. */
  6. import { Unit, Structure } from 'mol-model/structure';
  7. import { UnitsVisual } from '../representation';
  8. import { VisualUpdateState } from '../../util';
  9. import { UnitsLinesVisual, UnitsLinesParams } from '../units-visual';
  10. import { StructureElementIterator, getElementLoci, markElement } from './util/element';
  11. import { GaussianDensityProps, GaussianDensityParams } from 'mol-model/structure/structure/unit/gaussian-density';
  12. import { ParamDefinition as PD } from 'mol-util/param-definition';
  13. import { Lines } from 'mol-geo/geometry/lines/lines';
  14. import { computeMarchingCubesLines } from 'mol-geo/util/marching-cubes/algorithm';
  15. import { VisualContext } from 'mol-repr/representation';
  16. import { Theme } from 'mol-theme/theme';
  17. async function createGaussianWireframe(ctx: VisualContext, unit: Unit, structure: Structure, theme: Theme, props: GaussianDensityProps, lines?: Lines): Promise<Lines> {
  18. const { smoothness } = props
  19. const { transform, field, idField } = await unit.computeGaussianDensity(props, ctx.runtime)
  20. const params = {
  21. isoLevel: Math.exp(-smoothness),
  22. scalarField: field,
  23. idField
  24. }
  25. const wireframe = await computeMarchingCubesLines(params, lines).runAsChild(ctx.runtime)
  26. Lines.transformImmediate(wireframe, transform)
  27. return wireframe
  28. }
  29. export const GaussianWireframeParams = {
  30. ...UnitsLinesParams,
  31. ...GaussianDensityParams,
  32. lineSizeAttenuation: PD.Boolean(false),
  33. }
  34. export type GaussianWireframeParams = typeof GaussianWireframeParams
  35. export function GaussianWireframeVisual(): UnitsVisual<GaussianWireframeParams> {
  36. return UnitsLinesVisual<GaussianWireframeParams>({
  37. defaultProps: PD.getDefaultValues(GaussianWireframeParams),
  38. createGeometry: createGaussianWireframe,
  39. createLocationIterator: StructureElementIterator.fromGroup,
  40. getLoci: getElementLoci,
  41. mark: markElement,
  42. setUpdateState: (state: VisualUpdateState, newProps: PD.Values<GaussianWireframeParams>, currentProps: PD.Values<GaussianWireframeParams>) => {
  43. if (newProps.resolution !== currentProps.resolution) state.createGeometry = true
  44. if (newProps.radiusOffset !== currentProps.radiusOffset) state.createGeometry = true
  45. if (newProps.smoothness !== currentProps.smoothness) state.createGeometry = true
  46. if (newProps.useGpu !== currentProps.useGpu) state.createGeometry = true
  47. if (newProps.ignoreCache !== currentProps.ignoreCache) state.createGeometry = true
  48. }
  49. })
  50. }