interactions.ts 3.3 KB

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  1. /**
  2. * Copyright (c) 2019 mol* contributors, licensed under MIT, See LICENSE file for more info.
  3. *
  4. * @author Alexander Rose <alexander.rose@weirdbyte.de>
  5. */
  6. import { ParamDefinition as PD } from '../../../mol-util/param-definition';
  7. import { Representation, RepresentationParamsGetter, RepresentationContext } from '../../../mol-repr/representation';
  8. import { ThemeRegistryContext } from '../../../mol-theme/theme';
  9. import { Structure } from '../../../mol-model/structure';
  10. import { UnitsRepresentation, StructureRepresentation, StructureRepresentationStateBuilder, StructureRepresentationProvider, ComplexRepresentation } from '../../../mol-repr/structure/representation';
  11. import { InteractionsIntraUnitParams, InteractionsIntraUnitVisual } from './interactions-intra-unit-cylinder';
  12. import { UnitKindOptions, UnitKind } from '../../../mol-repr/structure/visual/util/common';
  13. import { InteractionsProvider } from '../interactions';
  14. import { InteractionsInterUnitParams, InteractionsInterUnitVisual } from './interactions-inter-unit-cylinder';
  15. import { CustomProperty } from '../../common/custom-property';
  16. const InteractionsVisuals = {
  17. 'intra-unit': (ctx: RepresentationContext, getParams: RepresentationParamsGetter<Structure, InteractionsIntraUnitParams>) => UnitsRepresentation('Intra-unit interactions cylinder', ctx, getParams, InteractionsIntraUnitVisual),
  18. 'inter-unit': (ctx: RepresentationContext, getParams: RepresentationParamsGetter<Structure, InteractionsInterUnitParams>) => ComplexRepresentation('Inter-unit interactions cylinder', ctx, getParams, InteractionsInterUnitVisual),
  19. }
  20. export const InteractionsParams = {
  21. ...InteractionsIntraUnitParams,
  22. ...InteractionsInterUnitParams,
  23. unitKinds: PD.MultiSelect<UnitKind>(['atomic'], UnitKindOptions),
  24. sizeFactor: PD.Numeric(0.3, { min: 0.01, max: 10, step: 0.01 }),
  25. visuals: PD.MultiSelect(['intra-unit', 'inter-unit'], PD.objectToOptions(InteractionsVisuals)),
  26. }
  27. export type InteractionsParams = typeof InteractionsParams
  28. export function getInteractionParams(ctx: ThemeRegistryContext, structure: Structure) {
  29. return PD.clone(InteractionsParams)
  30. }
  31. export type InteractionRepresentation = StructureRepresentation<InteractionsParams>
  32. export function InteractionRepresentation(ctx: RepresentationContext, getParams: RepresentationParamsGetter<Structure, InteractionsParams>): InteractionRepresentation {
  33. return Representation.createMulti('Interactions', ctx, getParams, StructureRepresentationStateBuilder, InteractionsVisuals as unknown as Representation.Def<Structure, InteractionsParams>)
  34. }
  35. export const InteractionsRepresentationProvider: StructureRepresentationProvider<InteractionsParams> = {
  36. label: 'Non-covalent Interactions',
  37. description: 'Displays non-covalent interactions as dashed cylinders.',
  38. factory: InteractionRepresentation,
  39. getParams: getInteractionParams,
  40. defaultValues: PD.getDefaultValues(InteractionsParams),
  41. defaultColorTheme: { name: 'interaction-type' },
  42. defaultSizeTheme: { name: 'uniform' },
  43. isApplicable: (structure: Structure) => structure.elementCount > 0,
  44. ensureCustomProperties: {
  45. attach: (ctx: CustomProperty.Context, structure: Structure) => InteractionsProvider.attach(ctx, structure, void 0, true),
  46. detach: (_, data) => InteractionsProvider.ref(data, false)
  47. }
  48. }