gaussian-surface.ts 3.1 KB

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  1. /**
  2. * Copyright (c) 2018-2021 mol* contributors, licensed under MIT, See LICENSE file for more info.
  3. *
  4. * @author Alexander Rose <alexander.rose@weirdbyte.de>
  5. */
  6. import { GaussianSurfaceMeshParams, StructureGaussianSurfaceMeshParams, StructureGaussianSurfaceVisual, GaussianSurfaceVisual } from '../visual/gaussian-surface-mesh';
  7. import { UnitsRepresentation } from '../units-representation';
  8. import { GaussianWireframeVisual, GaussianWireframeParams } from '../visual/gaussian-surface-wireframe';
  9. import { ParamDefinition as PD } from '../../../mol-util/param-definition';
  10. import { StructureRepresentation, StructureRepresentationProvider, StructureRepresentationStateBuilder, ComplexRepresentation } from '../representation';
  11. import { Representation, RepresentationParamsGetter, RepresentationContext } from '../../../mol-repr/representation';
  12. import { ThemeRegistryContext } from '../../../mol-theme/theme';
  13. import { Structure } from '../../../mol-model/structure';
  14. const GaussianSurfaceVisuals = {
  15. 'gaussian-surface-mesh': (ctx: RepresentationContext, getParams: RepresentationParamsGetter<Structure, GaussianSurfaceMeshParams>) => UnitsRepresentation('Gaussian surface mesh', ctx, getParams, GaussianSurfaceVisual),
  16. 'structure-gaussian-surface-mesh': (ctx: RepresentationContext, getParams: RepresentationParamsGetter<Structure, StructureGaussianSurfaceMeshParams>) => ComplexRepresentation('Structure-Gaussian surface mesh', ctx, getParams, StructureGaussianSurfaceVisual),
  17. 'gaussian-surface-wireframe': (ctx: RepresentationContext, getParams: RepresentationParamsGetter<Structure, GaussianWireframeParams>) => UnitsRepresentation('Gaussian surface wireframe', ctx, getParams, GaussianWireframeVisual),
  18. };
  19. export const GaussianSurfaceParams = {
  20. ...GaussianSurfaceMeshParams,
  21. ...GaussianWireframeParams,
  22. visuals: PD.MultiSelect(['gaussian-surface-mesh'], PD.objectToOptions(GaussianSurfaceVisuals)),
  23. };
  24. export type GaussianSurfaceParams = typeof GaussianSurfaceParams
  25. export function getGaussianSurfaceParams(ctx: ThemeRegistryContext, structure: Structure) {
  26. return PD.clone(GaussianSurfaceParams);
  27. }
  28. export type GaussianSurfaceRepresentation = StructureRepresentation<GaussianSurfaceParams>
  29. export function GaussianSurfaceRepresentation(ctx: RepresentationContext, getParams: RepresentationParamsGetter<Structure, GaussianSurfaceParams>): GaussianSurfaceRepresentation {
  30. return Representation.createMulti('Gaussian Surface', ctx, getParams, StructureRepresentationStateBuilder, GaussianSurfaceVisuals as unknown as Representation.Def<Structure, GaussianSurfaceParams>);
  31. }
  32. export const GaussianSurfaceRepresentationProvider = StructureRepresentationProvider({
  33. name: 'gaussian-surface',
  34. label: 'Gaussian Surface',
  35. description: 'Displays a gaussian molecular surface.',
  36. factory: GaussianSurfaceRepresentation,
  37. getParams: getGaussianSurfaceParams,
  38. defaultValues: PD.getDefaultValues(GaussianSurfaceParams),
  39. defaultColorTheme: { name: 'chain-id' },
  40. defaultSizeTheme: { name: 'uniform' },
  41. isApplicable: (structure: Structure) => structure.elementCount > 0
  42. });