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- <!DOCTYPE html><html class="default"><head><meta charSet="utf-8"/><meta http-equiv="x-ua-compatible" content="IE=edge"/><title>Em2dCrystalEntity | @rcsb/rcsb-saguaro-3d</title><meta name="description" content="Documentation for @rcsb/rcsb-saguaro-3d"/><meta name="viewport" content="width=device-width, initial-scale=1"/><link rel="stylesheet" href="../assets/style.css"/><link rel="stylesheet" href="../assets/highlight.css"/><script async src="../assets/search.js" id="search-script"></script></head><body><script>document.body.classList.add(localStorage.getItem("tsd-theme") || "os")</script><header><div class="tsd-page-toolbar"><div class="container"><div class="table-wrap"><div class="table-cell" id="tsd-search" data-base=".."><div class="field"><label for="tsd-search-field" class="tsd-widget search no-caption">Search</label><input type="text" id="tsd-search-field"/></div><ul class="results"><li class="state loading">Preparing search index...</li><li class="state failure">The search index is not available</li></ul><a href="../index.html" class="title">@rcsb/rcsb-saguaro-3d</a></div><div class="table-cell" id="tsd-widgets"><div id="tsd-filter"><a href="#" class="tsd-widget options no-caption" data-toggle="options">Options</a><div class="tsd-filter-group"><div class="tsd-select" id="tsd-filter-visibility"><span class="tsd-select-label">All</span><ul class="tsd-select-list"><li data-value="public">Public</li><li data-value="protected">Public/Protected</li><li data-value="private" class="selected">All</li></ul></div> <input type="checkbox" id="tsd-filter-inherited" checked/><label class="tsd-widget" for="tsd-filter-inherited">Inherited</label><input type="checkbox" id="tsd-filter-externals" checked/><label class="tsd-widget" for="tsd-filter-externals">Externals</label></div></div><a href="#" class="tsd-widget menu no-caption" data-toggle="menu">Menu</a></div></div></div></div><div class="tsd-page-title"><div class="container"><ul class="tsd-breadcrumb"><li><a href="../modules.html">@rcsb/rcsb-saguaro-3d</a></li><li><a href="../modules/RcsbFv3DAssembly.html">RcsbFv3DAssembly</a></li><li><a href="../modules/RcsbFv3DAssembly._internal_.html"><internal></a></li><li><a href="RcsbFv3DAssembly._internal_.Em2dCrystalEntity.html">Em2dCrystalEntity</a></li></ul><h1>Interface Em2dCrystalEntity </h1></div></div></header><div class="container container-main"><div class="row"><div class="col-8 col-content"><section class="tsd-panel tsd-hierarchy"><h3>Hierarchy</h3><ul class="tsd-hierarchy"><li><span class="target">Em2dCrystalEntity</span></li></ul></section><section class="tsd-panel-group tsd-index-group"><h2>Index</h2><section class="tsd-panel tsd-index-panel"><div class="tsd-index-content"><section class="tsd-index-section tsd-is-external"><h3>Properties</h3><ul class="tsd-index-list"><li class="tsd-kind-property tsd-parent-kind-interface tsd-is-external"><a href="RcsbFv3DAssembly._internal_.Em2dCrystalEntity.html#__typename" class="tsd-kind-icon">__typename</a></li><li class="tsd-kind-property tsd-parent-kind-interface tsd-is-external"><a href="RcsbFv3DAssembly._internal_.Em2dCrystalEntity.html#angle_gamma" class="tsd-kind-icon">angle_<wbr/>gamma</a></li><li class="tsd-kind-property tsd-parent-kind-interface tsd-is-external"><a href="RcsbFv3DAssembly._internal_.Em2dCrystalEntity.html#c_sampling_length" class="tsd-kind-icon">c_<wbr/>sampling_<wbr/>length</a></li><li class="tsd-kind-property tsd-parent-kind-interface tsd-is-external"><a href="RcsbFv3DAssembly._internal_.Em2dCrystalEntity.html#id" class="tsd-kind-icon">id</a></li><li class="tsd-kind-property tsd-parent-kind-interface tsd-is-external"><a href="RcsbFv3DAssembly._internal_.Em2dCrystalEntity.html#image_processing_id" class="tsd-kind-icon">image_<wbr/>processing_<wbr/>id</a></li><li class="tsd-kind-property tsd-parent-kind-interface tsd-is-external"><a href="RcsbFv3DAssembly._internal_.Em2dCrystalEntity.html#length_a" class="tsd-kind-icon">length_<wbr/>a</a></li><li class="tsd-kind-property tsd-parent-kind-interface tsd-is-external"><a href="RcsbFv3DAssembly._internal_.Em2dCrystalEntity.html#length_b" class="tsd-kind-icon">length_<wbr/>b</a></li><li class="tsd-kind-property tsd-parent-kind-interface tsd-is-external"><a href="RcsbFv3DAssembly._internal_.Em2dCrystalEntity.html#length_c" class="tsd-kind-icon">length_<wbr/>c</a></li><li class="tsd-kind-property tsd-parent-kind-interface tsd-is-external"><a href="RcsbFv3DAssembly._internal_.Em2dCrystalEntity.html#space_group_name_H_M" class="tsd-kind-icon">space_<wbr/>group_<wbr/>name_<wbr/>H_<wbr/>M</a></li></ul></section></div></section></section><section class="tsd-panel-group tsd-member-group tsd-is-external"><h2>Properties</h2><section class="tsd-panel tsd-member tsd-kind-property tsd-parent-kind-interface tsd-is-external"><a id="__typename" class="tsd-anchor"></a><h3 class="tsd-anchor-link"><span class="tsd-flag ts-flagOptional">Optional</span> __typename<a href="#__typename" aria-label="Permalink" class="tsd-anchor-icon"><svg xmlns="http://www.w3.org/2000/svg" class="icon icon-tabler icon-tabler-link" viewBox="0 0 24 24" stroke-width="2" stroke="currentColor" fill="none" stroke-linecap="round" stroke-linejoin="round"><path stroke="none" d="M0 0h24v24H0z" fill="none"></path><path d="M10 14a3.5 3.5 0 0 0 5 0l4 -4a3.5 3.5 0 0 0 -5 -5l-.5 .5"></path><path d="M14 10a3.5 3.5 0 0 0 -5 0l-4 4a3.5 3.5 0 0 0 5 5l.5 -.5"></path></svg></a></h3><div class="tsd-signature tsd-kind-icon">__typename<span class="tsd-signature-symbol">?:</span> <span class="tsd-signature-type">"Em2dCrystalEntity"</span></div><aside class="tsd-sources"><ul><li>Defined in node_modules/@rcsb/rcsb-api-tools/build/RcsbGraphQL/Types/Yosemite/GqlTypes.d.ts:1286</li></ul></aside></section><section class="tsd-panel tsd-member tsd-kind-property tsd-parent-kind-interface tsd-is-external"><a id="angle_gamma" class="tsd-anchor"></a><h3 class="tsd-anchor-link"><span class="tsd-flag ts-flagOptional">Optional</span> angle_<wbr/>gamma<a href="#angle_gamma" aria-label="Permalink" class="tsd-anchor-icon"><svg xmlns="http://www.w3.org/2000/svg" class="icon icon-tabler icon-tabler-link" viewBox="0 0 24 24" stroke-width="2" stroke="currentColor" fill="none" stroke-linecap="round" stroke-linejoin="round"><path stroke="none" d="M0 0h24v24H0z" fill="none"></path><path d="M10 14a3.5 3.5 0 0 0 5 0l4 -4a3.5 3.5 0 0 0 -5 -5l-.5 .5"></path><path d="M14 10a3.5 3.5 0 0 0 -5 0l-4 4a3.5 3.5 0 0 0 5 5l.5 -.5"></path></svg></a></h3><div class="tsd-signature tsd-kind-icon">angle_<wbr/>gamma<span class="tsd-signature-symbol">?:</span> <a href="../modules/RcsbFv3DAssembly._internal_.html" class="tsd-signature-type" data-tsd-kind="Namespace"><internal></a><span class="tsd-signature-symbol">.</span><a href="../modules/RcsbFv3DAssembly._internal_.html#Maybe-1" class="tsd-signature-type" data-tsd-kind="Type alias">Maybe</a><span class="tsd-signature-symbol"><</span><span class="tsd-signature-type">number</span><span class="tsd-signature-symbol">></span></div><aside class="tsd-sources"><ul><li>Defined in node_modules/@rcsb/rcsb-api-tools/build/RcsbGraphQL/Types/Yosemite/GqlTypes.d.ts:1288</li></ul></aside><div class="tsd-comment tsd-typography"><div class="lead">
- <p>Unit-cell angle gamma in degrees.</p>
- </div></div></section><section class="tsd-panel tsd-member tsd-kind-property tsd-parent-kind-interface tsd-is-external"><a id="c_sampling_length" class="tsd-anchor"></a><h3 class="tsd-anchor-link"><span class="tsd-flag ts-flagOptional">Optional</span> c_<wbr/>sampling_<wbr/>length<a href="#c_sampling_length" aria-label="Permalink" class="tsd-anchor-icon"><svg xmlns="http://www.w3.org/2000/svg" class="icon icon-tabler icon-tabler-link" viewBox="0 0 24 24" stroke-width="2" stroke="currentColor" fill="none" stroke-linecap="round" stroke-linejoin="round"><path stroke="none" d="M0 0h24v24H0z" fill="none"></path><path d="M10 14a3.5 3.5 0 0 0 5 0l4 -4a3.5 3.5 0 0 0 -5 -5l-.5 .5"></path><path d="M14 10a3.5 3.5 0 0 0 -5 0l-4 4a3.5 3.5 0 0 0 5 5l.5 -.5"></path></svg></a></h3><div class="tsd-signature tsd-kind-icon">c_<wbr/>sampling_<wbr/>length<span class="tsd-signature-symbol">?:</span> <a href="../modules/RcsbFv3DAssembly._internal_.html" class="tsd-signature-type" data-tsd-kind="Namespace"><internal></a><span class="tsd-signature-symbol">.</span><a href="../modules/RcsbFv3DAssembly._internal_.html#Maybe-1" class="tsd-signature-type" data-tsd-kind="Type alias">Maybe</a><span class="tsd-signature-symbol"><</span><span class="tsd-signature-type">number</span><span class="tsd-signature-symbol">></span></div><aside class="tsd-sources"><ul><li>Defined in node_modules/@rcsb/rcsb-api-tools/build/RcsbGraphQL/Types/Yosemite/GqlTypes.d.ts:1290</li></ul></aside><div class="tsd-comment tsd-typography"><div class="lead">
- <p>Length used to sample the reciprocal lattice lines in the c-direction.</p>
- </div></div></section><section class="tsd-panel tsd-member tsd-kind-property tsd-parent-kind-interface tsd-is-external"><a id="id" class="tsd-anchor"></a><h3 class="tsd-anchor-link">id<a href="#id" aria-label="Permalink" class="tsd-anchor-icon"><svg xmlns="http://www.w3.org/2000/svg" class="icon icon-tabler icon-tabler-link" viewBox="0 0 24 24" stroke-width="2" stroke="currentColor" fill="none" stroke-linecap="round" stroke-linejoin="round"><path stroke="none" d="M0 0h24v24H0z" fill="none"></path><path d="M10 14a3.5 3.5 0 0 0 5 0l4 -4a3.5 3.5 0 0 0 -5 -5l-.5 .5"></path><path d="M14 10a3.5 3.5 0 0 0 -5 0l-4 4a3.5 3.5 0 0 0 5 5l.5 -.5"></path></svg></a></h3><div class="tsd-signature tsd-kind-icon">id<span class="tsd-signature-symbol">:</span> <span class="tsd-signature-type">string</span></div><aside class="tsd-sources"><ul><li>Defined in node_modules/@rcsb/rcsb-api-tools/build/RcsbGraphQL/Types/Yosemite/GqlTypes.d.ts:1292</li></ul></aside><div class="tsd-comment tsd-typography"><div class="lead">
- <p>Unique key for the 2d_crystal_entity category.</p>
- </div></div></section><section class="tsd-panel tsd-member tsd-kind-property tsd-parent-kind-interface tsd-is-external"><a id="image_processing_id" class="tsd-anchor"></a><h3 class="tsd-anchor-link">image_<wbr/>processing_<wbr/>id<a href="#image_processing_id" aria-label="Permalink" class="tsd-anchor-icon"><svg xmlns="http://www.w3.org/2000/svg" class="icon icon-tabler icon-tabler-link" viewBox="0 0 24 24" stroke-width="2" stroke="currentColor" fill="none" stroke-linecap="round" stroke-linejoin="round"><path stroke="none" d="M0 0h24v24H0z" fill="none"></path><path d="M10 14a3.5 3.5 0 0 0 5 0l4 -4a3.5 3.5 0 0 0 -5 -5l-.5 .5"></path><path d="M14 10a3.5 3.5 0 0 0 -5 0l-4 4a3.5 3.5 0 0 0 5 5l.5 -.5"></path></svg></a></h3><div class="tsd-signature tsd-kind-icon">image_<wbr/>processing_<wbr/>id<span class="tsd-signature-symbol">:</span> <span class="tsd-signature-type">string</span></div><aside class="tsd-sources"><ul><li>Defined in node_modules/@rcsb/rcsb-api-tools/build/RcsbGraphQL/Types/Yosemite/GqlTypes.d.ts:1294</li></ul></aside><div class="tsd-comment tsd-typography"><div class="lead">
- <p>pointer to _em_image_processing.id in the EM_IMAGE_PROCESSING category.</p>
- </div></div></section><section class="tsd-panel tsd-member tsd-kind-property tsd-parent-kind-interface tsd-is-external"><a id="length_a" class="tsd-anchor"></a><h3 class="tsd-anchor-link"><span class="tsd-flag ts-flagOptional">Optional</span> length_<wbr/>a<a href="#length_a" aria-label="Permalink" class="tsd-anchor-icon"><svg xmlns="http://www.w3.org/2000/svg" class="icon icon-tabler icon-tabler-link" viewBox="0 0 24 24" stroke-width="2" stroke="currentColor" fill="none" stroke-linecap="round" stroke-linejoin="round"><path stroke="none" d="M0 0h24v24H0z" fill="none"></path><path d="M10 14a3.5 3.5 0 0 0 5 0l4 -4a3.5 3.5 0 0 0 -5 -5l-.5 .5"></path><path d="M14 10a3.5 3.5 0 0 0 -5 0l-4 4a3.5 3.5 0 0 0 5 5l.5 -.5"></path></svg></a></h3><div class="tsd-signature tsd-kind-icon">length_<wbr/>a<span class="tsd-signature-symbol">?:</span> <a href="../modules/RcsbFv3DAssembly._internal_.html" class="tsd-signature-type" data-tsd-kind="Namespace"><internal></a><span class="tsd-signature-symbol">.</span><a href="../modules/RcsbFv3DAssembly._internal_.html#Maybe-1" class="tsd-signature-type" data-tsd-kind="Type alias">Maybe</a><span class="tsd-signature-symbol"><</span><span class="tsd-signature-type">number</span><span class="tsd-signature-symbol">></span></div><aside class="tsd-sources"><ul><li>Defined in node_modules/@rcsb/rcsb-api-tools/build/RcsbGraphQL/Types/Yosemite/GqlTypes.d.ts:1296</li></ul></aside><div class="tsd-comment tsd-typography"><div class="lead">
- <p>Unit-cell length a in Angstroms.</p>
- </div></div></section><section class="tsd-panel tsd-member tsd-kind-property tsd-parent-kind-interface tsd-is-external"><a id="length_b" class="tsd-anchor"></a><h3 class="tsd-anchor-link"><span class="tsd-flag ts-flagOptional">Optional</span> length_<wbr/>b<a href="#length_b" aria-label="Permalink" class="tsd-anchor-icon"><svg xmlns="http://www.w3.org/2000/svg" class="icon icon-tabler icon-tabler-link" viewBox="0 0 24 24" stroke-width="2" stroke="currentColor" fill="none" stroke-linecap="round" stroke-linejoin="round"><path stroke="none" d="M0 0h24v24H0z" fill="none"></path><path d="M10 14a3.5 3.5 0 0 0 5 0l4 -4a3.5 3.5 0 0 0 -5 -5l-.5 .5"></path><path d="M14 10a3.5 3.5 0 0 0 -5 0l-4 4a3.5 3.5 0 0 0 5 5l.5 -.5"></path></svg></a></h3><div class="tsd-signature tsd-kind-icon">length_<wbr/>b<span class="tsd-signature-symbol">?:</span> <a href="../modules/RcsbFv3DAssembly._internal_.html" class="tsd-signature-type" data-tsd-kind="Namespace"><internal></a><span class="tsd-signature-symbol">.</span><a href="../modules/RcsbFv3DAssembly._internal_.html#Maybe-1" class="tsd-signature-type" data-tsd-kind="Type alias">Maybe</a><span class="tsd-signature-symbol"><</span><span class="tsd-signature-type">number</span><span class="tsd-signature-symbol">></span></div><aside class="tsd-sources"><ul><li>Defined in node_modules/@rcsb/rcsb-api-tools/build/RcsbGraphQL/Types/Yosemite/GqlTypes.d.ts:1298</li></ul></aside><div class="tsd-comment tsd-typography"><div class="lead">
- <p>Unit-cell length b in Angstroms.</p>
- </div></div></section><section class="tsd-panel tsd-member tsd-kind-property tsd-parent-kind-interface tsd-is-external"><a id="length_c" class="tsd-anchor"></a><h3 class="tsd-anchor-link"><span class="tsd-flag ts-flagOptional">Optional</span> length_<wbr/>c<a href="#length_c" aria-label="Permalink" class="tsd-anchor-icon"><svg xmlns="http://www.w3.org/2000/svg" class="icon icon-tabler icon-tabler-link" viewBox="0 0 24 24" stroke-width="2" stroke="currentColor" fill="none" stroke-linecap="round" stroke-linejoin="round"><path stroke="none" d="M0 0h24v24H0z" fill="none"></path><path d="M10 14a3.5 3.5 0 0 0 5 0l4 -4a3.5 3.5 0 0 0 -5 -5l-.5 .5"></path><path d="M14 10a3.5 3.5 0 0 0 -5 0l-4 4a3.5 3.5 0 0 0 5 5l.5 -.5"></path></svg></a></h3><div class="tsd-signature tsd-kind-icon">length_<wbr/>c<span class="tsd-signature-symbol">?:</span> <a href="../modules/RcsbFv3DAssembly._internal_.html" class="tsd-signature-type" data-tsd-kind="Namespace"><internal></a><span class="tsd-signature-symbol">.</span><a href="../modules/RcsbFv3DAssembly._internal_.html#Maybe-1" class="tsd-signature-type" data-tsd-kind="Type alias">Maybe</a><span class="tsd-signature-symbol"><</span><span class="tsd-signature-type">number</span><span class="tsd-signature-symbol">></span></div><aside class="tsd-sources"><ul><li>Defined in node_modules/@rcsb/rcsb-api-tools/build/RcsbGraphQL/Types/Yosemite/GqlTypes.d.ts:1300</li></ul></aside><div class="tsd-comment tsd-typography"><div class="lead">
- <p>Thickness of 2D crystal</p>
- </div></div></section><section class="tsd-panel tsd-member tsd-kind-property tsd-parent-kind-interface tsd-is-external"><a id="space_group_name_H_M" class="tsd-anchor"></a><h3 class="tsd-anchor-link"><span class="tsd-flag ts-flagOptional">Optional</span> space_<wbr/>group_<wbr/>name_<wbr/>H_<wbr/>M<a href="#space_group_name_H_M" aria-label="Permalink" class="tsd-anchor-icon"><svg xmlns="http://www.w3.org/2000/svg" class="icon icon-tabler icon-tabler-link" viewBox="0 0 24 24" stroke-width="2" stroke="currentColor" fill="none" stroke-linecap="round" stroke-linejoin="round"><path stroke="none" d="M0 0h24v24H0z" fill="none"></path><path d="M10 14a3.5 3.5 0 0 0 5 0l4 -4a3.5 3.5 0 0 0 -5 -5l-.5 .5"></path><path d="M14 10a3.5 3.5 0 0 0 -5 0l-4 4a3.5 3.5 0 0 0 5 5l.5 -.5"></path></svg></a></h3><div class="tsd-signature tsd-kind-icon">space_<wbr/>group_<wbr/>name_<wbr/>H_<wbr/>M<span class="tsd-signature-symbol">?:</span> <a href="../modules/RcsbFv3DAssembly._internal_.html" class="tsd-signature-type" data-tsd-kind="Namespace"><internal></a><span class="tsd-signature-symbol">.</span><a href="../modules/RcsbFv3DAssembly._internal_.html#Maybe-1" class="tsd-signature-type" data-tsd-kind="Type alias">Maybe</a><span class="tsd-signature-symbol"><</span><span class="tsd-signature-type">string</span><span class="tsd-signature-symbol">></span></div><aside class="tsd-sources"><ul><li>Defined in node_modules/@rcsb/rcsb-api-tools/build/RcsbGraphQL/Types/Yosemite/GqlTypes.d.ts:1314</li></ul></aside><div class="tsd-comment tsd-typography"><div class="lead">
- <p>There are 17 plane groups classified as oblique, rectangular, square, and hexagonal.
- To describe the symmetry of 2D crystals of biological molecules,
- plane groups are expanded to equivalent noncentrosymmetric space groups.
- The 2D crystal plane corresponds to the 'ab' plane of the space group.</p>
- </div><div><p> Enumerated space group descriptions include the plane group number in parentheses,
- the H-M plane group symbol, and the plane group class.</p>
- <p>Allowable values:
- C 1 2, C 2 2 2, P 1, P 1 2, P 1 21, P 2, P 2 2 2, P 2 2 21, P 2 21 21, P 3, P 3 1 2, P 3 2 1, P 4, P 4 2 2, P 4 21 2, P 6, P 6 2 2</p>
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