molecular-surface.ts 2.9 KB

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  1. /**
  2. * Copyright (c) 2018-2019 mol* contributors, licensed under MIT, See LICENSE file for more info.
  3. *
  4. * @author Alexander Rose <alexander.rose@weirdbyte.de>
  5. */
  6. import { MolecularSurfaceMeshVisual, MolecularSurfaceMeshParams } from '../visual/molecular-surface-mesh';
  7. import { UnitsRepresentation } from '../units-representation';
  8. import { ParamDefinition as PD } from '../../../mol-util/param-definition';
  9. import { StructureRepresentation, StructureRepresentationProvider, StructureRepresentationStateBuilder } from '../representation';
  10. import { Representation, RepresentationParamsGetter, RepresentationContext } from '../../../mol-repr/representation';
  11. import { ThemeRegistryContext } from '../../../mol-theme/theme';
  12. import { Structure } from '../../../mol-model/structure';
  13. import { MolecularSurfaceWireframeParams, MolecularSurfaceWireframeVisual } from '../visual/molecular-surface-wireframe';
  14. const MolecularSurfaceVisuals = {
  15. 'molecular-surface-mesh': (ctx: RepresentationContext, getParams: RepresentationParamsGetter<Structure, MolecularSurfaceMeshParams>) => UnitsRepresentation('Molecular surface mesh', ctx, getParams, MolecularSurfaceMeshVisual),
  16. 'molecular-surface-wireframe': (ctx: RepresentationContext, getParams: RepresentationParamsGetter<Structure, MolecularSurfaceWireframeParams>) => UnitsRepresentation('Molecular surface wireframe', ctx, getParams, MolecularSurfaceWireframeVisual),
  17. };
  18. export const MolecularSurfaceParams = {
  19. ...MolecularSurfaceMeshParams,
  20. ...MolecularSurfaceWireframeParams,
  21. smoothColors: PD.Select('off', PD.arrayToOptions(['off', 'vertex', 'volume'] as const)),
  22. visuals: PD.MultiSelect(['molecular-surface-mesh'], PD.objectToOptions(MolecularSurfaceVisuals)),
  23. };
  24. export type MolecularSurfaceParams = typeof MolecularSurfaceParams
  25. export function getMolecularSurfaceParams(ctx: ThemeRegistryContext, structure: Structure) {
  26. return PD.clone(MolecularSurfaceParams);
  27. }
  28. export type MolecularSurfaceRepresentation = StructureRepresentation<MolecularSurfaceParams>
  29. export function MolecularSurfaceRepresentation(ctx: RepresentationContext, getParams: RepresentationParamsGetter<Structure, MolecularSurfaceParams>): MolecularSurfaceRepresentation {
  30. return Representation.createMulti('Molecular Surface', ctx, getParams, StructureRepresentationStateBuilder, MolecularSurfaceVisuals as unknown as Representation.Def<Structure, MolecularSurfaceParams>);
  31. }
  32. export const MolecularSurfaceRepresentationProvider = StructureRepresentationProvider({
  33. name: 'molecular-surface',
  34. label: 'Molecular Surface',
  35. description: 'Displays a molecular surface.',
  36. factory: MolecularSurfaceRepresentation,
  37. getParams: getMolecularSurfaceParams,
  38. defaultValues: PD.getDefaultValues(MolecularSurfaceParams),
  39. defaultColorTheme: { name: 'chain-id' },
  40. defaultSizeTheme: { name: 'uniform' },
  41. isApplicable: (structure: Structure) => structure.elementCount > 0
  42. });