Class Behavior

Hierarchy

<internal>.WithSubscribers<<internal>.VolumeStreaming.Params>
- Behavior

Index

Constructors

Constructors

constructor

new Behavior(plugin: PluginContext, data: <internal>.VolumeServerInfo.Data): <internal>.VolumeStreaming.Behavior
Parameters
- plugin: PluginContext
- data: <internal>.VolumeServerInfo.Data
Returns <internal>.VolumeStreaming.Behavior
Overrides WithSubscribers.constructor
- Defined in node_modules/molstar/lib/mol-plugin/behavior/dynamic/volume-streaming/behavior.d.ts:150

Properties

`Private` _invTransform

_invTransform: any

`Private` cache

cache: any

channels

channels: Channels

`Private` createChannel

createChannel: any

data

data: <internal>.VolumeServerInfo.Data

`Private` getBoxFromLoci

getBoxFromLoci: any

`Private` getStructureRoot

getStructureRoot: any

infoMap

infoMap: Map<string, EntryData>

`Private` lastLoci

lastLoci: any

params

params: <internal>.Values<{ entry: <internal>.Mapped<NamedParams<<internal>.Values<{ channels: <internal>.Group<Normalize<{ em: Normalize<ChannelParams> }>> | <internal>.Group<Normalize<{ 2fo-fc: Normalize<ChannelParams>; fo-fc(+ve): Normalize<ChannelParams>; fo-fc(-ve): Normalize<ChannelParams> }>>; detailLevel: <internal>.Select<number>; view: <internal>.Mapped<NamedParams<Normalize<{ bottomLeft: <internal>.Vec3; isSelection: boolean; radius: number; selectionDetailLevel: number; topRight: <internal>.Vec3 }>, "auto"> | NamedParams<Normalize<{}>, "cell"> | NamedParams<Normalize<{}>, "off"> | NamedParams<Normalize<{ bottomLeft: <internal>.Vec3; topRight: <internal>.Vec3 }>, "box"> | NamedParams<Normalize<{ bottomLeft: <internal>.Vec3; radius: number; topRight: <internal>.Vec3 }>, "selection-box">> }>, string>> }>

`Private` parseCif

parseCif: any

plugin

plugin: PluginContext

`Private` queryData

queryData: any

`Private` ref

ref: any

`Private` updateAuto

updateAuto: any

`Private` updateAutoParams

updateAutoParams: any

`Private` updateSelectionBox

updateSelectionBox: any

`Private` updateSelectionBoxParams

updateSelectionBoxParams: any

Accessors

info

get info(): EntryData
Returns EntryData
- Defined in node_modules/molstar/lib/mol-plugin/behavior/dynamic/volume-streaming/behavior.d.ts:135

Methods

dispose

dispose(): void
Returns void
Inherited from WithSubscribers.dispose
- Defined in node_modules/molstar/lib/mol-plugin/behavior/behavior.d.ts:147

getDescription

getDescription(): "" | "Selection" | "Static Box" | "Cell"
Returns "" | "Selection" | "Static Box" | "Cell"
- Defined in node_modules/molstar/lib/mol-plugin/behavior/dynamic/volume-streaming/behavior.d.ts:149

register

register(ref: string): void
Parameters
- ref: string
Returns void
Overrides WithSubscribers.register
- Defined in node_modules/molstar/lib/mol-plugin/behavior/dynamic/volume-streaming/behavior.d.ts:141

`Protected` subscribeCommand

subscribeCommand<T>(cmd: <internal>.PluginCommand<T>, action: <internal>.PluginCommand.Action<T>): void
Type Parameters
- T
Parameters
- cmd: <internal>.PluginCommand<T>
- action: <internal>.PluginCommand.Action<T>
Returns void
Inherited from WithSubscribers.subscribeCommand
- Defined in node_modules/molstar/lib/mol-plugin/behavior/behavior.d.ts:145

`Protected` subscribeObservable

subscribeObservable<T>(o: Observable<T>, action: ((v: T) => void)): void
Type Parameters
- T
Parameters
- o: Observable<T>
- action: ((v: T) => void)
  - - (v: T): void
    - Parameters
      
      v: T
      
      Returns void
Returns void
Inherited from WithSubscribers.subscribeObservable
- Defined in node_modules/molstar/lib/mol-plugin/behavior/behavior.d.ts:146

unregister

unregister(): void
Returns void
- Defined in node_modules/molstar/lib/mol-plugin/behavior/dynamic/volume-streaming/behavior.d.ts:142

update

update(params: <internal>.Values<{ entry: <internal>.Mapped<NamedParams<<internal>.Values<{ channels: <internal>.Group<Normalize<{ em: Normalize<ChannelParams> }>> | <internal>.Group<Normalize<{ 2fo-fc: Normalize<ChannelParams>; fo-fc(+ve): Normalize<ChannelParams>; fo-fc(-ve): Normalize<ChannelParams> }>>; detailLevel: <internal>.Select<number>; view: <internal>.Mapped<NamedParams<Normalize<{ bottomLeft: <internal>.Vec3; isSelection: boolean; radius: number; selectionDetailLevel: number; topRight: <internal>.Vec3 }>, "auto"> | NamedParams<Normalize<{}>, "cell"> | NamedParams<Normalize<{}>, "off"> | NamedParams<Normalize<{ bottomLeft: <internal>.Vec3; topRight: <internal>.Vec3 }>, "box"> | NamedParams<Normalize<{ bottomLeft: <internal>.Vec3; radius: number; topRight: <internal>.Vec3 }>, "selection-box">> }>, string>> }>): Promise<boolean>
Parameters
- params: <internal>.Values<{ entry: <internal>.Mapped<NamedParams<<internal>.Values<{ channels: <internal>.Group<Normalize<{ em: Normalize<ChannelParams> }>> | <internal>.Group<Normalize<{ 2fo-fc: Normalize<ChannelParams>; fo-fc(+ve): Normalize<ChannelParams>; fo-fc(-ve): Normalize<ChannelParams> }>>; detailLevel: <internal>.Select<number>; view: <internal>.Mapped<NamedParams<Normalize<{ bottomLeft: <internal>.Vec3; isSelection: boolean; radius: number; selectionDetailLevel: number; topRight: <internal>.Vec3 }>, "auto"> | NamedParams<Normalize<{}>, "cell"> | NamedParams<Normalize<{}>, "off"> | NamedParams<Normalize<{ bottomLeft: <internal>.Vec3; topRight: <internal>.Vec3 }>, "box"> | NamedParams<Normalize<{ bottomLeft: <internal>.Vec3; radius: number; topRight: <internal>.Vec3 }>, "selection-box">> }>, string>> }>
Returns Promise<boolean>
- Defined in node_modules/molstar/lib/mol-plugin/behavior/dynamic/volume-streaming/behavior.d.ts:147

Class Behavior

Hierarchy

Index

Constructors

Properties

Accessors

Methods

Constructors

constructor

Parameters

plugin: PluginContext

data: <internal>.VolumeServerInfo.Data

Returns <internal>.VolumeStreaming.Behavior

Properties

Private _invTransform

Private cache

channels

Private createChannel

data

Private getBoxFromLoci

Private getStructureRoot

infoMap

Private lastLoci

params

Private parseCif

plugin

Private queryData

Private ref

Private updateAuto

Private updateAutoParams

Private updateSelectionBox

Private updateSelectionBoxParams

Accessors

info

Returns EntryData

Methods

dispose

Returns void

getDescription

Returns "" | "Selection" | "Static Box" | "Cell"

register

Parameters

ref: string

Returns void

Protected subscribeCommand

Type Parameters

T

Parameters

cmd: <internal>.PluginCommand<T>

action: <internal>.PluginCommand.Action<T>

Returns void

Protected subscribeObservable

Type Parameters

T

Parameters

o: Observable<T>

action: ((v: T) => void)

Parameters

v: T

Returns void

Returns void

unregister

Returns void

update

Parameters

Returns Promise<boolean>

Settings

Member Visibility

Theme

`Private` _invTransform

`Private` cache

`Private` createChannel

`Private` getBoxFromLoci

`Private` getStructureRoot

`Private` lastLoci

`Private` parseCif

`Private` queryData

`Private` ref

`Private` updateAuto

`Private` updateAutoParams

`Private` updateSelectionBox

`Private` updateSelectionBoxParams

`Protected` subscribeCommand

`Protected` subscribeObservable