Options
All
  • Public
  • Public/Protected
  • All
Menu

Hierarchy

  • Em3dFitting

Index

Properties

__typename?: "Em3dFitting"
details?: <internal>.Maybe<string>

Any additional details regarding fitting of atomic coordinates into the 3DEM volume, including data and considerations from other methods used in computation of the model.

Examples: Initial local fitting was done using Chimera and then NMFF was used for flexible fitting.

id: string

The value of _em_3d_fitting.id must uniquely identify a fitting procedure of atomic coordinates into 3dem reconstructed map volume.

method?: <internal>.Maybe<string>

The method used to fit atomic coordinates into the 3dem reconstructed map.

overall_b_value?: <internal>.Maybe<number>

The overall B (temperature factor) value for the 3d-em volume.

ref_protocol?: <internal>.Maybe<string>

The refinement protocol used.

Allowable values: AB INITIO MODEL, BACKBONE TRACE, FLEXIBLE FIT, OTHER, RIGID BODY FIT

ref_space?: <internal>.Maybe<string>

A flag to indicate whether fitting was carried out in real or reciprocal refinement space.

Allowable values: REAL, RECIPROCAL

target_criteria?: <internal>.Maybe<string>

The measure used to assess quality of fit of the atomic coordinates in the 3DEM map volume.

Examples: Cross-correlation coefficient

Generated using TypeDoc