Class Coarse<K, C>

Type parameters

K: Gaussians | Spheres
C: CoarseSphereConformation | CoarseGaussianConformation

Hierarchy

Coarse
- <internal>.Unit.Spheres
- Gaussians

Implements

<internal>.Unit.Base

Index

Constructors

constructor

Properties

Accessors

Methods

Constructors

constructor

new Coarse<K, C>(id: number, invariantId: number, chainGroupId: number, traits: <internal>.Unit.Traits, model: <internal>.Model, kind: K, elements: <internal>.Set, conformation: ArrayMapping<<internal>.ElementIndex>, props: <internal>.CoarseProperties): Coarse<K, C>

- Defined in node_modules/molstar/lib/mol-model/structure/structure/unit.d.ts:174
Type parameters
- K: Spheres | Gaussians
- C: CoarseSphereConformation | CoarseGaussianConformation
Parameters
- id: number
- invariantId: number
- chainGroupId: number
- traits: <internal>.Unit.Traits
- model: <internal>.Model
- kind: K
- elements: <internal>.Set
- conformation: ArrayMapping<<internal>.ElementIndex>
- props: <internal>.CoarseProperties
Returns Coarse<K, C>

Properties

Readonly chainGroupId

chainGroupId: number

Readonly coarseConformation

coarseConformation: C

Readonly coarseElements

coarseElements: CoarseElements

Readonly conformation

conformation: ArrayMapping<<internal>.ElementIndex>

Readonly elements

elements: <internal>.Set

Private getCoarseConformation

getCoarseConformation: any

Readonly id

id: number

Readonly invariantId

invariantId: number

invariant ID stays the same even if the Operator/conformation changes.

Readonly kind

kind: K

Readonly model

model: <internal>.Model

Readonly objectPrimitive

objectPrimitive: "sphere" | "gaussian"

From mmCIF/IHM schema: _ihm_model_representation_details.model_object_primitive.

Readonly props

props: <internal>.CoarseProperties

Readonly traits

traits: <internal>.Unit.Traits

Accessors

boundary

get boundary(): Boundary

Implementation of Base.boundary
- Defined in node_modules/molstar/lib/mol-model/structure/structure/unit.d.ts:168
Returns Boundary

gapElements

get gapElements(): SortedArray<<internal>.ElementIndex>

Implementation of Base.gapElements
- Defined in node_modules/molstar/lib/mol-model/structure/structure/unit.d.ts:172
Returns SortedArray<<internal>.ElementIndex>

lookup3d

get lookup3d(): Lookup3D<UnitIndex>

Implementation of Base.lookup3d
- Defined in node_modules/molstar/lib/mol-model/structure/structure/unit.d.ts:169
Returns Lookup3D<UnitIndex>

polymerElements

get polymerElements(): SortedArray<<internal>.ElementIndex>

Implementation of Base.polymerElements
- Defined in node_modules/molstar/lib/mol-model/structure/structure/unit.d.ts:171
Returns SortedArray<<internal>.ElementIndex>

principalAxes

get principalAxes(): PrincipalAxes

- Defined in node_modules/molstar/lib/mol-model/structure/structure/unit.d.ts:170
Returns PrincipalAxes

Methods

applyOperator

applyOperator(id: number, operator: SymmetryOperator, dontCompose?: boolean): <internal>.Unit

Implementation of Base.applyOperator
- Defined in node_modules/molstar/lib/mol-model/structure/structure/unit.d.ts:166
Parameters
- id: number
- operator: SymmetryOperator
- Optional dontCompose: boolean
Returns <internal>.Unit

getChild

getChild(elements: <internal>.Set): <internal>.Unit

Implementation of Base.getChild
- Defined in node_modules/molstar/lib/mol-model/structure/structure/unit.d.ts:165
Parameters
- elements: <internal>.Set
Returns <internal>.Unit

remapModel

remapModel(model: <internal>.Model, dynamicBonds: boolean, props?: <internal>.CoarseProperties): <internal>.Unit.Spheres | Gaussians

Implementation of Base.remapModel
- Defined in node_modules/molstar/lib/mol-model/structure/structure/unit.d.ts:167
Parameters
- model: <internal>.Model
- dynamicBonds: boolean
- Optional props: <internal>.CoarseProperties
Returns <internal>.Unit.Spheres | Gaussians

Generated using TypeDoc