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@rcsb/rcsb-saguaro-3d
RcsbFv3DAssembly
<internal>
VolumeStreaming
Behavior
Class Behavior
Hierarchy
<internal>
.
WithSubscribers
<
<internal>
.
VolumeStreaming
.
Params
>
Behavior
Index
Constructors
constructor
Properties
_inv
Transform
cache
channels
create
Channel
data
get
Box
From
Loci
get
Structure
Root
info
Map
last
Loci
params
parse
Cif
plugin
query
Data
ref
update
Auto
update
Auto
Params
update
Selection
Box
update
Selection
Box
Params
Accessors
info
Methods
get
Description
register
subscribe
Command
subscribe
Observable
unregister
update
Constructors
constructor
new
Behavior
(
plugin
:
PluginContext
, data
:
<internal>
.
VolumeServerInfo
.
Data
)
:
<internal>
.
VolumeStreaming
.
Behavior
Parameters
plugin:
PluginContext
data:
<internal>
.
VolumeServerInfo
.
Data
Returns
<internal>
.
VolumeStreaming
.
Behavior
Properties
Private
_inv
Transform
_inv
Transform
:
any
Private
cache
cache
:
any
channels
channels
:
Channels
Private
create
Channel
create
Channel
:
any
data
data
:
<internal>
.
VolumeServerInfo
.
Data
Private
get
Box
From
Loci
get
Box
From
Loci
:
any
Private
get
Structure
Root
get
Structure
Root
:
any
info
Map
info
Map
:
Map
<
string
,
EntryData
>
Private
last
Loci
last
Loci
:
any
params
params
:
<internal>
.
Values
<
{
entry
:
<internal>
.
Mapped
<
NamedParams
<
<internal>
.
Values
<
{
channels
:
<internal>
.
Group
<
Normalize
<
{
em
:
Normalize
<
ChannelParams
>
}
>
>
|
<internal>
.
Group
<
Normalize
<
{
2fo-fc
:
Normalize
<
ChannelParams
>
;
fo-fc(+ve)
:
Normalize
<
ChannelParams
>
;
fo-fc(-ve)
:
Normalize
<
ChannelParams
>
}
>
>
;
detailLevel
:
<internal>
.
Select
<
number
>
;
view
:
<internal>
.
Mapped
<
NamedParams
<
Normalize
<
{}
>
,
"cell"
>
|
NamedParams
<
Normalize
<
{}
>
,
"off"
>
|
NamedParams
<
Normalize
<
{
bottomLeft
:
<internal>
.
Vec3
;
isSelection
:
boolean
;
radius
:
number
;
selectionDetailLevel
:
number
;
topRight
:
<internal>
.
Vec3
}
>
,
"auto"
>
|
NamedParams
<
Normalize
<
{
bottomLeft
:
<internal>
.
Vec3
;
topRight
:
<internal>
.
Vec3
}
>
,
"box"
>
|
NamedParams
<
Normalize
<
{
bottomLeft
:
<internal>
.
Vec3
;
radius
:
number
;
topRight
:
<internal>
.
Vec3
}
>
,
"selection-box"
>
>
}
>
,
string
>
>
}
>
Private
parse
Cif
parse
Cif
:
any
plugin
plugin
:
PluginContext
Private
query
Data
query
Data
:
any
Private
ref
ref
:
any
Private
update
Auto
update
Auto
:
any
Private
update
Auto
Params
update
Auto
Params
:
any
Private
update
Selection
Box
update
Selection
Box
:
any
Private
update
Selection
Box
Params
update
Selection
Box
Params
:
any
Accessors
info
get
info
(
)
:
EntryData
Returns
EntryData
Methods
get
Description
get
Description
(
)
:
""
|
"Selection"
|
"Static Box"
|
"Cell"
Returns
""
|
"Selection"
|
"Static Box"
|
"Cell"
register
register
(
ref
:
string
)
:
void
Parameters
ref:
string
Returns
void
Protected
subscribe
Command
subscribe
Command
<
T
>
(
cmd
:
<internal>
.
PluginCommand
<
T
>
, action
:
<internal>
.
PluginCommand
.
Action
<
T
>
)
:
void
Type parameters
T
Parameters
cmd:
<internal>
.
PluginCommand
<
T
>
action:
<internal>
.
PluginCommand
.
Action
<
T
>
Returns
void
Protected
subscribe
Observable
subscribe
Observable
<
T
>
(
o
:
Observable
<
T
>
, action
:
(
v
:
T
)
=>
void
)
:
void
Type parameters
T
Parameters
o:
Observable
<
T
>
action:
(
v
:
T
)
=>
void
(
v
:
T
)
:
void
Parameters
v:
T
Returns
void
Returns
void
unregister
unregister
(
)
:
void
Returns
void
update
update
(
params
:
<internal>
.
Values
<
{
entry
:
<internal>
.
Mapped
<
NamedParams
<
<internal>
.
Values
<
{
channels
:
<internal>
.
Group
<
Normalize
<
{
em
:
Normalize
<
ChannelParams
>
}
>
>
|
<internal>
.
Group
<
Normalize
<
{
2fo-fc
:
Normalize
<
ChannelParams
>
;
fo-fc(+ve)
:
Normalize
<
ChannelParams
>
;
fo-fc(-ve)
:
Normalize
<
ChannelParams
>
}
>
>
;
detailLevel
:
<internal>
.
Select
<
number
>
;
view
:
<internal>
.
Mapped
<
NamedParams
<
Normalize
<
{}
>
,
"cell"
>
|
NamedParams
<
Normalize
<
{}
>
,
"off"
>
|
NamedParams
<
Normalize
<
{
bottomLeft
:
<internal>
.
Vec3
;
isSelection
:
boolean
;
radius
:
number
;
selectionDetailLevel
:
number
;
topRight
:
<internal>
.
Vec3
}
>
,
"auto"
>
|
NamedParams
<
Normalize
<
{
bottomLeft
:
<internal>
.
Vec3
;
topRight
:
<internal>
.
Vec3
}
>
,
"box"
>
|
NamedParams
<
Normalize
<
{
bottomLeft
:
<internal>
.
Vec3
;
radius
:
number
;
topRight
:
<internal>
.
Vec3
}
>
,
"selection-box"
>
>
}
>
,
string
>
>
}
>
)
:
Promise
<
boolean
>
Parameters
params:
<internal>
.
Values
<
{
entry
:
<internal>
.
Mapped
<
NamedParams
<
<internal>
.
Values
<
{
channels
:
<internal>
.
Group
<
Normalize
<
{
em
:
Normalize
<
ChannelParams
>
}
>
>
|
<internal>
.
Group
<
Normalize
<
{
2fo-fc
:
Normalize
<
ChannelParams
>
;
fo-fc(+ve)
:
Normalize
<
ChannelParams
>
;
fo-fc(-ve)
:
Normalize
<
ChannelParams
>
}
>
>
;
detailLevel
:
<internal>
.
Select
<
number
>
;
view
:
<internal>
.
Mapped
<
NamedParams
<
Normalize
<
{}
>
,
"cell"
>
|
NamedParams
<
Normalize
<
{}
>
,
"off"
>
|
NamedParams
<
Normalize
<
{
bottomLeft
:
<internal>
.
Vec3
;
isSelection
:
boolean
;
radius
:
number
;
selectionDetailLevel
:
number
;
topRight
:
<internal>
.
Vec3
}
>
,
"auto"
>
|
NamedParams
<
Normalize
<
{
bottomLeft
:
<internal>
.
Vec3
;
topRight
:
<internal>
.
Vec3
}
>
,
"box"
>
|
NamedParams
<
Normalize
<
{
bottomLeft
:
<internal>
.
Vec3
;
radius
:
number
;
topRight
:
<internal>
.
Vec3
}
>
,
"selection-box"
>
>
}
>
,
string
>
>
}
>
Returns
Promise
<
boolean
>
Modules
Rcsb
Fv3DAssembly
<internal>
"/
Users/joan/devel/rcsb-
saguaro-
3d/node_
modules/molstar/lib/mol-
geo/geometry/text/font-
atlas"
"/
Users/joan/devel/rcsb-
saguaro-
3d/node_
modules/molstar/lib/mol-
gl/render-
object"
"/
Users/joan/devel/rcsb-
saguaro-
3d/node_
modules/molstar/lib/mol-
gl/renderable/schema"
"/
Users/joan/devel/rcsb-
saguaro-
3d/node_
modules/molstar/lib/mol-
model/structure/model"
"/
Users/joan/devel/rcsb-
saguaro-
3d/node_
modules/molstar/lib/mol-
model/structure/model/properties/atomic"
"/
Users/joan/devel/rcsb-
saguaro-
3d/node_
modules/molstar/lib/mol-
plugin-
state/builder/structure/representation"
"/
Users/joan/devel/rcsb-
saguaro-
3d/node_
modules/molstar/lib/mol-
plugin-
state/transforms/data"
"/
Users/joan/devel/rcsb-
saguaro-
3d/node_
modules/molstar/lib/mol-
plugin-
state/transforms/misc"
"/
Users/joan/devel/rcsb-
saguaro-
3d/node_
modules/molstar/lib/mol-
plugin-
state/transforms/model"
"/
Users/joan/devel/rcsb-
saguaro-
3d/node_
modules/molstar/lib/mol-
plugin-
state/transforms/representation"
"/
Users/joan/devel/rcsb-
saguaro-
3d/node_
modules/molstar/lib/mol-
plugin-
state/transforms/shape"
"/
Users/joan/devel/rcsb-
saguaro-
3d/node_
modules/molstar/lib/mol-
plugin-
state/transforms/volume"
"/
Users/joan/devel/rcsb-
saguaro-
3d/node_
modules/molstar/lib/mol-
repr/structure/representation"
"/
Users/joan/devel/rcsb-
saguaro-
3d/node_
modules/molstar/lib/mol-
repr/volume/representation"
"/
Users/joan/devel/rcsb-
saguaro-
3d/node_
modules/molstar/lib/mol-
script/language/symbol"
"/
Users/joan/devel/rcsb-
saguaro-
3d/node_
modules/molstar/lib/mol-
script/language/type"
"/
Users/joan/devel/rcsb-
saguaro-
3d/node_
modules/molstar/lib/mol-
state/state/builder"
"/
Users/joan/devel/rcsb-
saguaro-
3d/node_
modules/molstar/lib/mol-
state/transformer"
"/
Users/joan/devel/rcsb-
saguaro-
3d/node_
modules/molstar/lib/mol-
task/execution/synchronous"
"/
Users/joan/devel/rcsb-
saguaro-
3d/node_
modules/molstar/lib/mol-
util/binding"
"/
Users/joan/devel/rcsb-
saguaro-
3d/node_
modules/molstar/lib/mol-
util/clip"
"/
Users/joan/devel/rcsb-
saguaro-
3d/node_
modules/molstar/lib/mol-
util/color/color"
"/
Users/joan/devel/rcsb-
saguaro-
3d/node_
modules/molstar/lib/mol-
util/color/index"
"/
Users/joan/devel/rcsb-
saguaro-
3d/node_
modules/molstar/lib/mol-
util/uuid"
Arguments
Array
Encoder
Assembly
Asset
Atomic
Hierarchy
Atomic
Index
Axes3D
Binding
Bit
Flags
Box3D
Bundle
Buttons
Type
Camera
Camera
Transition
Manager
Canvas3D
Canvas3DContext
Category
Cell
Cif
Category
Cif
Export
Context
Cif
Field
Clipping
Coarse
Hierarchy
Collection
Color
Color
Theme
Column
Compiled
Query
Fn
Coordinates
Cube
File
Custom
Property
Descriptor
Cylinders
Direct
Volume
Dx
File
Encoding
Expression
Field
Generators
Geometry
Grid
Image
Indexed
Indexed
Input
Observer
Int
Adjacency
Graph
Int
Map
Inter
Unit
Bonds
Inter
Unit
Graph
Interactivity
Manager
Interval
Intra
Unit
Bonds
Iterator
Keyed
Lines
List
Location
Loci
Loci
Loci
Log
Entry
Map
Marker
Actions
Mat3
Mat4
Material
Mesh
Model
Modifiers
Keys
Mol
Script
Builder
Object3D
Object
Event
Ordered
Map
Ordered
Set
Ordered
Set
Overpaint
Picking
Id
Pixel
Data
Plugin
Animation
Manager
Plugin
Behavior
Plugin
Command
Plugin
Spec
Plugin
State
Plugin
State
Animation
Plugin
State
Snapshot
Manager
Plugin
Toast
Manager
Points
Principal
Axes
Progress
Quat
Query
Runtime
Arguments
Query
Symbol
Runtime
Renderer
Representation
Representation
Provider
Result
Runtime
Context
Rx
Event
Helper
Scene
Script
Segmentation
Seq
Sequence
Set
Set
Shape
Size
Theme
Sorted
Array
Sorted
Ranges
Spacegroup
Spacegroup
Cell
Sphere3D
Spheres
Stack
State
State
Action
State
Builder
State
Object
State
Object
Cell
State
Object
Ref
State
Object
Selector
State
Tree
State
Tree
Spine
Stereo
Camera
Structure
Structure
Structure
Component
Manager
Structure
Hierarchy
Manager
Structure
Query
Structure
Representation
Builder
Structure
Representation
Preset
Provider
Structure
Representation
Registry
Structure
Result
Structure
Selection
Structure
Sequence
Substance
Symmetry
Group
Symmetry
Operator
Table
Task
Task
Manager
Tensor
Text
Texture
Mesh
Theme
Time
Topology
Traits
Trajectory
Hierarchy
Preset
Provider
Transform
Transformer
Transparency
Type
UUID
Unit
Unit
Ring
Unit
Rings
Value
Box
Value
Cell
Value
Ref
Vec2
Vec3
Vec4
Viewport
Viewport
Screenshot
Helper
Visual
Visual
Update
State
Volume
Volume
Hierarchy
Manager
Volume
Representation
Registry
Volume
Server
Header
Volume
Server
Info
Volume
Streaming
Rcsb
Fv3DCustom
Behavior
constructor
_inv
Transform
cache
channels
create
Channel
data
get
Box
From
Loci
get
Structure
Root
info
Map
last
Loci
params
parse
Cif
plugin
query
Data
ref
update
Auto
update
Auto
Params
update
Selection
Box
update
Selection
Box
Params
info
get
Description
register
subscribe
Command
subscribe
Observable
unregister
update
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