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Hierarchy

  • EntitySrcNat

Index

Properties

__typename?: "EntitySrcNat"
common_name?: <internal>.Maybe<string>

The common name of the organism from which the entity was isolated.

Examples: man, yeast, bacteria

details?: <internal>.Maybe<string>

A description of special aspects of the organism from which the entity was isolated.

genus?: <internal>.Maybe<string>

The genus of the organism from which the entity was isolated.

Examples: Homo, Saccharomyces, Escherichia

pdbx_alt_source_flag?: <internal>.Maybe<string>

This data item identifies cases in which an alternative source modeled.

Allowable values: model, sample

pdbx_atcc?: <internal>.Maybe<string>

Americal Tissue Culture Collection number.

Examples: 6051

pdbx_beg_seq_num?: <internal>.Maybe<number>

The beginning polymer sequence position for the polymer section corresponding to this source.

A reference to the sequence position in the entity_poly category.

pdbx_cell?: <internal>.Maybe<string>

A particular cell type.

Examples: BHK-21

pdbx_cell_line?: <internal>.Maybe<string>

The specific line of cells.

Examples: HELA

pdbx_cellular_location?: <internal>.Maybe<string>

Identifies the location inside (or outside) the cell.

pdbx_end_seq_num?: <internal>.Maybe<number>

The ending polymer sequence position for the polymer section corresponding to this source.

A reference to the sequence position in the entity_poly category.

pdbx_fragment?: <internal>.Maybe<string>

A domain or fragment of the molecule.

pdbx_ncbi_taxonomy_id?: <internal>.Maybe<string>

NCBI Taxonomy identifier for the source organism.

Reference:

Wheeler DL, Chappey C, Lash AE, Leipe DD, Madden TL, Schuler GD, Tatusova TA, Rapp BA (2000). Database resources of the National Center for Biotechnology Information. Nucleic Acids Res 2000 Jan 1;28(1):10-4

Benson DA, Karsch-Mizrachi I, Lipman DJ, Ostell J, Rapp BA, Wheeler DL (2000). GenBank. Nucleic Acids Res 2000 Jan 1;28(1):15-18.

pdbx_organ?: <internal>.Maybe<string>

Organized group of tissues that carries on a specialized function.

Examples: KIDNEY

pdbx_organelle?: <internal>.Maybe<string>

Organized structure within cell.

Examples: MITOCHONDRIA

pdbx_organism_scientific?: <internal>.Maybe<string>

Scientific name of the organism of the natural source.

Examples: Bos taurus, BOS TAURUS, SUS SCROFA, ASPERGILLUS ORYZAE

pdbx_plasmid_details?: <internal>.Maybe<string>

Details about the plasmid.

Examples: PLC28 DERIVATIVE

pdbx_plasmid_name?: <internal>.Maybe<string>

The plasmid containing the gene.

Examples: pB322

pdbx_secretion?: <internal>.Maybe<string>

Identifies the secretion from which the molecule was isolated.

Examples: saliva, urine, venom

pdbx_src_id: number

This data item is an ordinal identifier for entity_src_nat data records.

pdbx_variant?: <internal>.Maybe<string>

Identifies the variant.

species?: <internal>.Maybe<string>

The species of the organism from which the entity was isolated.

Examples: sapiens, cerevisiae, coli

strain?: <internal>.Maybe<string>

The strain of the organism from which the entity was isolated.

Examples: DH5a, BMH 71-18

tissue?: <internal>.Maybe<string>

The tissue of the organism from which the entity was isolated.

Examples: heart, liver, eye lens

tissue_fraction?: <internal>.Maybe<string>

The subcellular fraction of the tissue of the organism from which the entity was isolated.

Examples: mitochondria, nucleus, membrane

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