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Hierarchy

  • RcsbTargetCofactors

Index

Properties

__typename?: "RcsbTargetCofactors"
binding_assay_value?: <internal>.Maybe<number>

The value measured or determined by the assay.

Examples: null

binding_assay_value_type?: <internal>.Maybe<string>

The type of measurement or value determined by the assay.

Allowable values: pAC50, pEC50, pIC50, pKd, pKi

cofactor_InChIKey?: <internal>.Maybe<string>

Standard IUPAC International Chemical Identifier (InChI) descriptor key for the cofactor.

InChI, the IUPAC International Chemical Identifier, by Stephen R Heller, Alan McNaught, Igor Pletnev, Stephen Stein and Dmitrii Tchekhovskoi, Journal of Cheminformatics, 2015, 7:23

Examples: BNOCDEBUFVJMQI-REOHCLBHSA-N

cofactor_SMILES?: <internal>.Maybe<string>

Simplified molecular-input line-entry system (SMILES) descriptor for the cofactor.

Weininger D (February 1988). "SMILES, a chemical language and information system. 1. Introduction to methodology and encoding rules". Journal of Chemical Information and Modeling. 28 (1): 31-6.

Weininger D, Weininger A, Weininger JL (May 1989). "SMILES. 2. Algorithm for generation of unique SMILES notation", Journal of Chemical Information and Modeling. 29 (2): 97-101.

Examples: OC(=O)CHOP(O)=O

cofactor_chem_comp_id?: <internal>.Maybe<string>

The chemical component definition identifier for the cofactor.

Examples: 0Z3, CD9

cofactor_description?: <internal>.Maybe<string>

The cofactor description.

Examples: A synthetic naphthoquinone without the isoprenoid side chain and biological activity, but can be converted to active vitamin K2, menaquinone, after alkylation in vivo.

cofactor_name?: <internal>.Maybe<string>

The cofactor name.

Examples: Menadione

cofactor_prd_id?: <internal>.Maybe<string>

The BIRD definition identifier for the cofactor.

Examples: PRD_000010

cofactor_resource_id?: <internal>.Maybe<string>

Identifier for the cofactor assigned by the resource.

Examples: CHEMBL1987, DB00170

mechanism_of_action?: <internal>.Maybe<string>

Mechanism of action describes the biochemical interaction through which the cofactor produces a pharmacological effect.

Examples: Menadione (vitamin K3) is involved as a cofactor in the posttranslational gamma-carboxylation of glutamic acid residues of certain proteins i n the body. These proteins include the vitamin K-dependent coagulation factors II (prothrombin), VII (proconvertin), IX (Christmas factor), X (Stuart factor), protein C, protein S, protein Zv and a growth-arrest-specific factor (Gas6).

neighbor_flag?: <internal>.Maybe<string>

A flag to indicate the cofactor is a structural neighbor of this entity.

Allowable values: N, Y

patent_nos?: <internal>.Maybe<<internal>.Maybe<string>[]>

Patent numbers reporting the pharmacology or activity data.

pubmed_ids?: <internal>.Maybe<<internal>.Maybe<number>[]>

PubMed identifiers for literature supporting the pharmacology or activity data.

resource_name?: <internal>.Maybe<string>

Resource providing target and cofactor data.

Allowable values: ChEMBL, DrugBank, Pharos

resource_version?: <internal>.Maybe<string>

Version of the information distributed by the data resource.

Examples: V4_0_2

target_resource_id?: <internal>.Maybe<string>

Identifier for the target assigned by the resource.

Examples: P00734, CHEMBL2242

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